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所在平台: Udemy |
课程主页: https://www.udemy.com/course/gatk4-pipeline-for-sarsncov2-galaxy/
课程评论：没有评论
课程名称：全基因组变异检测 @ Galaxy 课程概述：本课程专注于使用GATK4管道在Galaxy平台进行科学工作流程，特别适合没有Linux操作系统和命令行接口（CLI）使用经验的学生。课程旨在帮助来自生命科学各个领域的本科生和研究生（包括生物技术、微生物学、生物化学和分子生物科学等专业）独立完成从数据获取到发表文章的整个过程。课程提供的丰富NGS数据工具集成在一个平台上，减少了学生在个人电脑上管理各种软件和工具的困难。此外，尽管世界各地有云计算和高性能计算集群设施，但本课程将引导学生如何在有限的经济条件下进行多组学数据分析，而无需具备编程、Bash脚本、R统计包等专业知识。该课程是进入NGS多组学数据分析世界的起点，完成基础课程后，学生将更好地理解利用Linux CLI和Bash脚本进行更大基因组的分析。
GATK4 pipeline using Galaxy is a scientific workflow especially for the students not having expertise in Linux operating system and other command-line interfaces (CLI) for NGS data analysis. This course will cater to undergraduate and postgraduate students from a wide range of life sciences disciplines including biotechnology, microbiology, biochemistry, and molecular biosciences to work independently from data retrieval to publishing their articles. A plethora of NGS data tools are available on a single platform, otherwise, it's very difficult to manage all the latest releases of software/tools on your personal computers, if yes, we have other space, storage, and expertise issues to work on CLI being a biology student at an individual level. No doubt there are cloud computing and commercial high performance computing cluster facilities are available in the world but this course will provide you the insight that how to analyze multi-omics data with limited financial resources without having much expertise in programming, Bash scripting, R statistical packages, and knowhow to computer languages e.g. Python.This course is the start of NGS multi-omics data analysis world, once the students are done with this basic course, they would be in a better position to understand the same analysis using Linux CLI bash scripting for analyzing their bigger genomes.
