Genomic Data Science with Galaxy

开始时间: 04/22/2022 持续时间: 4 weeks

所在平台: CourseraArchive 课程类别: 其他类别 大学或机构: Johns Hopkins University(约翰•霍普金斯大学)

课程主页: https://www.coursera.org/course/gengalaxy

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课程详情

The Galaxy Project (http://galaxyproject.org/) provides user friendly software for producing reproducible genomic pipelines for data analysis. This class will introduce the Galaxy Software system all the way from getting an account to building, running, and sharing a reproducible analysis pipeline.

课程大纲

1. The challenge of reproducibility

2. Introduction to the Galaxy platform

3. Working with genomic Intervals

4. Galaxy Workflows

5. Annotation, Sharing, Publishing

6. Sequence Data Quality Control

7. ChIP-seq analysis with MACS

8. RNA-seq mapping and 9. assembly

9. Galaxy on the cloud

10. Installing your own Galaxy

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